![]() A discussion of the usage of Chimera in real-world situations is given, along with anticipated future directions. Other extensions include Multalign Viewer, for showing multiple sequence alignments and associated structures ViewDock, for screening docked ligand orientations Movie, for replaying molecular dynamics trajectories and Volume Viewer, for display and analysis of volumetric data. Two unusual extensions are presented: Multiscale, which adds the ability to visualize large-scale molecular assemblies such as viral coats, and Collaboratory, which allows researchers to share a Chimera session interactively despite being at separate locales. ![]() ![]() This architecture ensures that the extension mechanism satisfies the demands of outside developers who wish to incorporate new features. Chimera is segmented into a core that provides basic services and visualization, and extensions that provide most higher level functionality. The design, implementation, and capabilities of an extensible visualization system, UCSF Chimera, are discussed.
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